Annie Xin, Frederick Masson, Yang Liao, Simon Preston, Tianxia Guan, Renee Gloury, Moshe Olshansky, Jian-Xin Lin, Peng Li, T. Speed, G. Smyth, Matthias Ernst, Warren J Leonard, Marc Pellegrini, Susan M Kaech, Stephen L Nutt, Wei Shi, Gabrielle T Belz, Axel Kallies. A molecular threshold for effector CD8(+) T cell differentiation controlled by transcription factors Blimp-1 and T-bet. Nature Immunology, 17, 422-+, 2016. doi: 10.1038/ni.3410.
F Masson, A Xin, Y Liao, S Preston, T Guan, R Gloury, M Olshansky, J-X Lin, P Li, T. Speed, G. Smyth, M Ernst, WJ Leonard, M Pellegrini, S Kaech, SL Nutt, W Shi, GT Belz, A Kallies. A combinatorial threshold model for effector differentiation of CD8(+) T cells mediated by Blimp-1 and T-bet. European Journal of Immunology, 46, 5 (1pp), 2016.
L. Gandolfo, M. Bahlo, T. Speed. Dating Rare Mutations from Small Samples with Dense Marker Data. Genetics, 197, 1315-U437, 2014. doi: 10.1534/genetics.114.164616.
D Chandrananda, NP Thorne, D Ganesamoorthy, DL Bruno, Y Benjamini, T. Speed, HR Slater, M. Bahlo. Investigating and Correcting Plasma DNA Sequencing Coverage Bias to Enhance Aneuploidy Discovery. PLoS One, 9, e86993 (14pp), 2014. doi: 10.1371/journal.pone.0086993.
Iris Tan, Leanne Mackin, Nancy Wang, A. Papenfuss, Colleen Elso, Michelle Ashton, Fiona Quirk, B. Phipson, M. Bahlo, T. Speed, G. Smyth, Grant Morahan, Thomas Brodnicki. Congenic mouse strains identify a novel gene for which allelic variation affects susceptibility to type 1 diabetes. Journal of Immunology, 186, 2011.
Current Postgraduate Supervision
|Daniel CAMERON||"Computational problems in cancer genomics data"|
|Lyndal HENDEN||"Analysis of structural variation in sequencing data in pedigrees"|
|Stephen LUEN||"Analysis of the residual disease samples from the NeoALTTO study"|
|Ehtesham MOFIZ||"Scabies mite genome project"|
Past Postgraduate Supervision
|Benjamin LANSDELL||"Numerical models of the Wnt cell-signaling pathway"|
Past MSc Students
|Benjamin LANSDELL||"Computational Gene Prediction Using Generalised Hidden Markov Models and Tiling Arrays"|